This module supports:
- Input SMILES
- 2D molecular rendering
- 3D molecular rendering
- Data-driven success probability estimation
- Chemformer one-step retrosynthesis with beam outputs
References
- Irwin, R.; Dimitriadis, S.; He, J.; Bjerrum, E. J. Chemformer: A Pre-Trained Transformer for Computational Chemistry. Mach. Learn.: Sci. Technol. 2022, 3 (1), 015022. https://doi.org/10.1088/2632-2153/ac3ffb
Open-source repositories:
- MolecularAI/Chemformer — Pre-trained BART transformer for retrosynthesis
- MolecularAI/pysmilesutils — SMILES tokenization & utilities